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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000002_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-2-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 2, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000005_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-5-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 5, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 6, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000005_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-6-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 6, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 6, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000006_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-6-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 6, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000009_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-9-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 9, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 9, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000009_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-9-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 9, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 10, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000009_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-10-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 10, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000013_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-13-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 13, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 13, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000013_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-13-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 13, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000016_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-16-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 16, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000016_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-17-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 17, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 17, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000020_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-20-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 20, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 20, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000020_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-20-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 20, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 21, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 24, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000024_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-24-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 24, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 24, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000024_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-24-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 24, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000027_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-28-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 28, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 28, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000031_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-31-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 31, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 32, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 35, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000035_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-35-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 35, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 35, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000035_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-35-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 35, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Binning": "1", "Andor-ReadoutTime": "38.19", "COM4-Handshaking": "Off", "Andor-FrameTransfer": "Off", "Andor-Description": "Andor camera adapter", "COM3-DelayBetweenCharsMs": "0.0000", "PixelType": "GRAY16", "Andor-TransposeXY": "0", "COM1-DelayBetweenCharsMs": "0.0000", "COM4-DelayBetweenCharsMs": "0.0000", "Andor-Advanced | Snap Image Additional Delay (ms)": "0", "TILightPath-ExtraDelayMs": "0.0000", "Andor-Exposure": "20.00", "Andor-TransposeCorrection": "0", "COM4-AnswerTimeout": "500.0000", "Andor-CCDTemperature Help": "Wait for temperature to stabilize before acquisition.", "COM4-Description": "Serial port driver (boost:asio)", "COM3-Description": "Serial port driver (boost:asio)", "YPositionUm": -937.6, "COM3-Parity": "None", "COM1-BaudRate": "9600", "Andor-VerticalSpeed": "3.73", "Shutter-A-Description": "Sutter Lambda shutter adapter", "XYStage-TransposeMirrorY": "0", "XPositionUm": 13107.300000000001, "XYStage-TransposeMirrorX": "0", "Andor-TimeOut": "10000", "Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000038_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-38-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 38, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 39, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:24:00 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "2", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 2, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000038_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-39-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 39, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 39, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000039_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-39-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 39, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000042_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-42-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 42, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 42, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:24:40 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "1", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000042_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-42-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 42, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 43, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000042_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-43-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 43, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Binning": "1", "Andor-ReadoutTime": "38.19", "COM4-Handshaking": "Off", "Andor-FrameTransfer": "Off", "Andor-Description": "Andor camera adapter", "COM3-DelayBetweenCharsMs": "0.0000", "PixelType": "GRAY16", "Andor-TransposeXY": "0", "COM1-DelayBetweenCharsMs": "0.0000", "COM4-DelayBetweenCharsMs": "0.0000", "Andor-Advanced | Snap Image Additional Delay (ms)": "0", "TILightPath-ExtraDelayMs": "0.0000", "Andor-Exposure": "100.00", "Andor-TransposeCorrection": "0", "COM4-AnswerTimeout": "500.0000", "Andor-CCDTemperature Help": "Wait for temperature to stabilize before acquisition.", "COM4-Description": "Serial port driver (boost:asio)", "COM3-Description": "Serial port driver (boost:asio)", "YPositionUm": -937.6, "COM3-Parity": "None", "COM1-BaudRate": "9600", "Andor-VerticalSpeed": "3.73", "Shutter-A-Description": "Sutter Lambda shutter adapter", "XYStage-TransposeMirrorY": "0", "XPositionUm": 13107.300000000001, "XYStage-TransposeMirrorX": "0", "Andor-TimeOut": "10000", "Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000045_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-46-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 46, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 46, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000046_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-46-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 46, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 46, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000046_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-46-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 46, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000049_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-49-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 49, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 50, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:25:50 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "2", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 2, "TIScope-SoftwareVersion": "4.4.1.728", "COM3-Handshaking": "Off", "Andor-Gain": "3", "Core-Shutter": "IntensiLightShutter", "TILightPath-State": "1", "UUID": "664a6fac-779c-4149-9aa6-b79657b20e6c", "Core-Camera": "Andor", "Core-TimeoutMs": "5000", "Core-SLM": "", "XYStage-JoyStick Fast Speed": "60", "Shutter-A-NDSetting": "1", "XYStage-Maximum Speed (Do Not Change)": "8.5760", "ElapsedTime-ms": 492105, "TIPFSStatus-FullFocusTimeoutMs": "5000.0000", "COM1-Handshaking": "Off", "TIPFSStatus-State": "On", "Andor-Shutter TTL Value": "High to Open", "IntensiLightShutter-Description": "Nikon IntensiLight Shutter adapter", "Frame": 49, "Core-ChannelGroup": "Channel", "PositionIndex": 1, "Width": 1004, "WaitInterval": null, "TITIRF-Mirror": "Out", "Shutter-A-Port": "COM1", "TIFilterBlock1-Name": "TIFilterBlock1", "IntensiLightShutter-Name": "IntensiLightShutter", "COM3-StopBits": "1", "PositionName": "Pos1", "TINosePiece-ExtraDelayMs": "0.0000", "PixelSizeUm": 0.08, "Height": 1002, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000049_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-50-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 50, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 50, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", "AxisPositions": null, "Andor-1. 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000050_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-50-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 50, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000053_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-53-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 53, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 53, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"TIScope-SoftwareVersion": "4.4.1.728", "COM3-Handshaking": "Off", "Andor-Gain": "3", "Core-Shutter": "IntensiLightShutter", "TILightPath-State": "1", "UUID": "a1f3d169-4600-4499-a507-62e232535029", "Core-Camera": "Andor", "Core-TimeoutMs": "5000", "Core-SLM": "", "XYStage-JoyStick Fast Speed": "60", "Shutter-A-NDSetting": "1", "XYStage-Maximum Speed (Do Not Change)": "8.5760", "ElapsedTime-ms": 531631, "TIPFSStatus-FullFocusTimeoutMs": "5000.0000", "COM1-Handshaking": "Off", "TIPFSStatus-State": "On", "Andor-Shutter TTL Value": "High to Open", "IntensiLightShutter-Description": "Nikon IntensiLight Shutter adapter", "Frame": 53, "Core-ChannelGroup": "Channel", "PositionIndex": 1, "Width": 1004, "WaitInterval": null, "TITIRF-Mirror": "Out", "Shutter-A-Port": "COM1", "TIFilterBlock1-Name": "TIFilterBlock1", "IntensiLightShutter-Name": "IntensiLightShutter", "COM3-StopBits": "1", "PositionName": "Pos1", "TINosePiece-ExtraDelayMs": "0.0000", "PixelSizeUm": 0.08, "Height": 1002, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000053_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-53-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 53, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 54, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000056_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-57-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 57, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 57, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000057_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-57-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 57, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 57, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000057_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-57-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 57, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000060_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-60-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 60, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 61, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000060_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-61-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 61, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 61, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000061_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-61-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 61, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000064_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-64-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 64, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 64, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000064_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-64-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 64, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 65, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000064_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-65-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 65, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000067_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-68-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 68, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"TIScope-SoftwareVersion": "4.4.1.728", "COM3-Handshaking": "Off", "Andor-Gain": "3", "Core-Shutter": "Shutter-A", "TILightPath-State": "1", "UUID": "407f5349-8300-4465-b213-b8a445294158", "Core-Camera": "Andor", "Core-TimeoutMs": "5000", "Core-SLM": "", "XYStage-JoyStick Fast Speed": "60", "Shutter-A-NDSetting": "1", "XYStage-Maximum Speed (Do Not Change)": "8.5760", "ElapsedTime-ms": 681532, "TIPFSStatus-FullFocusTimeoutMs": "5000.0000", "COM1-Handshaking": "Off", "TIPFSStatus-State": "On", "Andor-Shutter TTL Value": "High to Open", "IntensiLightShutter-Description": "Nikon IntensiLight Shutter adapter", "Frame": 68, "Core-ChannelGroup": "Channel", "PositionIndex": 1, "Width": 1004, "WaitInterval": null, "TITIRF-Mirror": "Out", "Shutter-A-Port": "COM1", "TIFilterBlock1-Name": "TIFilterBlock1", "IntensiLightShutter-Name": "IntensiLightShutter", "COM3-StopBits": "1", "PositionName": "Pos1", "TINosePiece-ExtraDelayMs": "0.0000", "PixelSizeUm": 0.08, "Height": 1002, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000068_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-68-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 68, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 68, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Binning": "1", "Andor-ReadoutTime": "38.19", "COM4-Handshaking": "Off", "Andor-FrameTransfer": "Off", "Andor-Description": "Andor camera adapter", "COM3-DelayBetweenCharsMs": "0.0000", "PixelType": "GRAY16", "Andor-TransposeXY": "0", "COM1-DelayBetweenCharsMs": "0.0000", "COM4-DelayBetweenCharsMs": "0.0000", "Andor-Advanced | Snap Image Additional Delay (ms)": "0", "TILightPath-ExtraDelayMs": "0.0000", "Andor-Exposure": "20.00", "Andor-TransposeCorrection": "0", "COM4-AnswerTimeout": "500.0000", "Andor-CCDTemperature Help": "Wait for temperature to stabilize before acquisition.", "COM4-Description": "Serial port driver (boost:asio)", "COM3-Description": "Serial port driver (boost:asio)", "YPositionUm": -937.6, "COM3-Parity": "None", "COM1-BaudRate": "9600", "Andor-VerticalSpeed": "3.73", "Shutter-A-Description": "Sutter Lambda shutter adapter", "XYStage-TransposeMirrorY": "0", "XPositionUm": 13107.300000000001, "XYStage-TransposeMirrorX": "0", "Andor-TimeOut": "10000", "Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000071_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-71-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 71, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 72, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:29:30 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "2", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 2, "TIScope-SoftwareVersion": "4.4.1.728", "COM3-Handshaking": "Off", "Andor-Gain": "3", "Core-Shutter": "IntensiLightShutter", "TILightPath-State": "1", "UUID": "0044b720-5a0f-4b46-b7fe-feb28f233c73", "Core-Camera": "Andor", "Core-TimeoutMs": "5000", "Core-SLM": "", "XYStage-JoyStick Fast Speed": "60", "Shutter-A-NDSetting": "1", "XYStage-Maximum Speed (Do Not Change)": "8.5760", "ElapsedTime-ms": 712148, "TIPFSStatus-FullFocusTimeoutMs": "5000.0000", "COM1-Handshaking": "Off", "TIPFSStatus-State": "On", "Andor-Shutter TTL Value": "High to Open", "IntensiLightShutter-Description": "Nikon IntensiLight Shutter adapter", "Frame": 71, "Core-ChannelGroup": "Channel", "PositionIndex": 1, "Width": 1004, "WaitInterval": null, "TITIRF-Mirror": "Out", "Shutter-A-Port": "COM1", "TIFilterBlock1-Name": "TIFilterBlock1", "IntensiLightShutter-Name": "IntensiLightShutter", "COM3-StopBits": "1", "PositionName": "Pos1", "TINosePiece-ExtraDelayMs": "0.0000", "PixelSizeUm": 0.08, "Height": 1002, "Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000071_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-72-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 72, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 72, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000072_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-72-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 72, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000075_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-75-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 75, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 75, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:30:10 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "1", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 1, "TIScope-SoftwareVersion": "4.4.1.728", "COM3-Handshaking": "Off", "Andor-Gain": "3", "Core-Shutter": "IntensiLightShutter", "TILightPath-State": "1", "UUID": "495d7d40-e22e-4c4b-998d-b37f4823d37a", "Core-Camera": "Andor", "Core-TimeoutMs": "5000", "Core-SLM": "", "XYStage-JoyStick Fast Speed": "60", "Shutter-A-NDSetting": "1", "XYStage-Maximum Speed (Do Not Change)": "8.5760", "ElapsedTime-ms": 751683, "TIPFSStatus-FullFocusTimeoutMs": "5000.0000", "COM1-Handshaking": "Off", "TIPFSStatus-State": "On", "Andor-Shutter TTL Value": "High to Open", "IntensiLightShutter-Description": "Nikon IntensiLight Shutter adapter", "Frame": 75, "Core-ChannelGroup": "Channel", "PositionIndex": 1, "Width": 1004, "WaitInterval": null, "TITIRF-Mirror": "Out", "Shutter-A-Port": "COM1", "TIFilterBlock1-Name": "TIFilterBlock1", "IntensiLightShutter-Name": "IntensiLightShutter", "COM3-StopBits": "1", "PositionName": "Pos1", "TINosePiece-ExtraDelayMs": "0.0000", "PixelSizeUm": 0.08, "Height": 1002, 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"Binning": "1", "Andor-ReadoutTime": "38.19", "COM4-Handshaking": "Off", "Andor-FrameTransfer": "Off", "Andor-Description": "Andor camera adapter", "COM3-DelayBetweenCharsMs": "0.0000", "PixelType": "GRAY16", "Andor-TransposeXY": "0", "COM1-DelayBetweenCharsMs": "0.0000", "COM4-DelayBetweenCharsMs": "0.0000", "Andor-Advanced | Snap Image Additional Delay (ms)": "0", "TILightPath-ExtraDelayMs": "0.0000", "Andor-Exposure": "20.00", "Andor-TransposeCorrection": "0", "COM4-AnswerTimeout": "500.0000", "Andor-CCDTemperature Help": "Wait for temperature to stabilize before acquisition.", "COM4-Description": "Serial port driver (boost:asio)", "COM3-Description": "Serial port driver (boost:asio)", "YPositionUm": -937.6, "COM3-Parity": "None", "COM1-BaudRate": "9600", "Andor-VerticalSpeed": "3.73", "Shutter-A-Description": "Sutter Lambda shutter adapter", "XYStage-TransposeMirrorY": "0", "XPositionUm": 13107.300000000001, "XYStage-TransposeMirrorX": "0", "Andor-TimeOut": "10000", "Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000075_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-75-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 75, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 76, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000075_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-76-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 76, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000079_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-79-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 79, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 79, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000079_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-79-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 79, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000082_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-83-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 83, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 83, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 86, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000086_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-86-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 86, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 87, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000086_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-87-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 87, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000090_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-90-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 90, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 90, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000090_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-90-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 90, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000093_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-93-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 93, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 94, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:33:10 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "2", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 2, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000093_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-94-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 94, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 94, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000097_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-97-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 97, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 98, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 101, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000104_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-104-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 104, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000104_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-105-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 105, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 105, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000105_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-105-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 105, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000108_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-108-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 108, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 108, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:35:40 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "1", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000108_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-108-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 108, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 109, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000108_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-109-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 109, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000111_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-112-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 112, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:36:20 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "1", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 0, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000112_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-112-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 112, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 112, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000112_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-112-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 112, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:36:50 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "2", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 2, "TIScope-SoftwareVersion": "4.4.1.728", "COM3-Handshaking": "Off", "Andor-Gain": "3", "Core-Shutter": "IntensiLightShutter", "TILightPath-State": "1", "UUID": "cf14f67c-885a-49c5-8db1-5b3ffbe833ff", "Core-Camera": "Andor", "Core-TimeoutMs": "5000", "Core-SLM": "", "XYStage-JoyStick Fast Speed": "60", "Shutter-A-NDSetting": "1", "XYStage-Maximum Speed (Do Not Change)": "8.5760", "ElapsedTime-ms": 1152124, "TIPFSStatus-FullFocusTimeoutMs": "5000.0000", "COM1-Handshaking": "Off", "TIPFSStatus-State": "On", "Andor-Shutter TTL Value": "High to Open", "IntensiLightShutter-Description": "Nikon IntensiLight Shutter adapter", "Frame": 115, "Core-ChannelGroup": "Channel", "PositionIndex": 1, "Width": 1004, "WaitInterval": null, "TITIRF-Mirror": "Out", "Shutter-A-Port": "COM1", "TIFilterBlock1-Name": "TIFilterBlock1", "IntensiLightShutter-Name": "IntensiLightShutter", "COM3-StopBits": "1", "PositionName": "Pos1", "TINosePiece-ExtraDelayMs": "0.0000", "PixelSizeUm": 0.08, "Height": 1002, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000115_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-116-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 116, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 116, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000116_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-116-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 116, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000119_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-119-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 119, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 119, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:37:30 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "1", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 1, "TIScope-SoftwareVersion": "4.4.1.728", "COM3-Handshaking": "Off", "Andor-Gain": "3", "Core-Shutter": "IntensiLightShutter", "TILightPath-State": "1", "UUID": "c662bc36-2034-479e-9820-0b13e39e9515", "Core-Camera": "Andor", "Core-TimeoutMs": "5000", "Core-SLM": "", "XYStage-JoyStick Fast Speed": "60", "Shutter-A-NDSetting": "1", "XYStage-Maximum Speed (Do Not Change)": "8.5760", "ElapsedTime-ms": 1191631, "TIPFSStatus-FullFocusTimeoutMs": "5000.0000", "COM1-Handshaking": "Off", "TIPFSStatus-State": "On", "Andor-Shutter TTL Value": "High to Open", "IntensiLightShutter-Description": "Nikon IntensiLight Shutter adapter", "Frame": 119, "Core-ChannelGroup": "Channel", "PositionIndex": 1, "Width": 1004, "WaitInterval": null, "TITIRF-Mirror": "Out", "Shutter-A-Port": "COM1", "TIFilterBlock1-Name": "TIFilterBlock1", "IntensiLightShutter-Name": "IntensiLightShutter", "COM3-StopBits": "1", "PositionName": "Pos1", "TINosePiece-ExtraDelayMs": "0.0000", "PixelSizeUm": 0.08, "Height": 1002, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000119_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-119-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 119, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 120, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000122_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-123-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 123, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 123, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:38:10 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "1", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 0, 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000123_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-123-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 123, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 123, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000123_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-123-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 123, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000126_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-127-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 127, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 127, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000130_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-130-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 130, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000130_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-130-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 130, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 131, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000130_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-131-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 131, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000134_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-134-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 134, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000134_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-134-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 134, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Binning": "1", "Andor-ReadoutTime": "38.19", "COM4-Handshaking": "Off", "Andor-FrameTransfer": "Off", "Andor-Description": "Andor camera adapter", "COM3-DelayBetweenCharsMs": "0.0000", "PixelType": "GRAY16", "Andor-TransposeXY": "0", "COM1-DelayBetweenCharsMs": "0.0000", "COM4-DelayBetweenCharsMs": "0.0000", "Andor-Advanced | Snap Image Additional Delay (ms)": "0", "TILightPath-ExtraDelayMs": "0.0000", "Andor-Exposure": "20.00", "Andor-TransposeCorrection": "0", "COM4-AnswerTimeout": "500.0000", "Andor-CCDTemperature Help": "Wait for temperature to stabilize before acquisition.", "COM4-Description": "Serial port driver (boost:asio)", "COM3-Description": "Serial port driver (boost:asio)", "YPositionUm": -937.6, "COM3-Parity": "None", "COM1-BaudRate": "9600", "Andor-VerticalSpeed": "3.73", "Shutter-A-Description": "Sutter Lambda shutter adapter", "XYStage-TransposeMirrorY": "0", "XPositionUm": 13107.300000000001, "XYStage-TransposeMirrorX": "0", "Andor-TimeOut": "10000", "Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000137_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-137-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 137, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 138, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:40:30 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "2", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 2, "TIScope-SoftwareVersion": "4.4.1.728", "COM3-Handshaking": "Off", "Andor-Gain": "3", "Core-Shutter": "IntensiLightShutter", "TILightPath-State": "1", "UUID": "1d5fcce1-feb9-4398-b772-0ab7080057c5", "Core-Camera": "Andor", "Core-TimeoutMs": "5000", "Core-SLM": "", "XYStage-JoyStick Fast Speed": "60", "Shutter-A-NDSetting": "1", "XYStage-Maximum Speed (Do Not Change)": "8.5760", "ElapsedTime-ms": 1372149, "TIPFSStatus-FullFocusTimeoutMs": "5000.0000", "COM1-Handshaking": "Off", "TIPFSStatus-State": "On", "Andor-Shutter TTL Value": "High to Open", "IntensiLightShutter-Description": "Nikon IntensiLight Shutter adapter", "Frame": 137, "Core-ChannelGroup": "Channel", "PositionIndex": 1, "Width": 1004, "WaitInterval": null, "TITIRF-Mirror": "Out", "Shutter-A-Port": "COM1", "TIFilterBlock1-Name": "TIFilterBlock1", "IntensiLightShutter-Name": "IntensiLightShutter", "COM3-StopBits": "1", "PositionName": "Pos1", "TINosePiece-ExtraDelayMs": "0.0000", "PixelSizeUm": 0.08, "Height": 1002, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000137_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-138-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 138, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 138, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000138_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-138-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 138, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Binning": "1", "Andor-ReadoutTime": "38.19", "COM4-Handshaking": "Off", "Andor-FrameTransfer": "Off", "Andor-Description": "Andor camera adapter", "COM3-DelayBetweenCharsMs": "0.0000", "PixelType": "GRAY16", "Andor-TransposeXY": "0", "COM1-DelayBetweenCharsMs": "0.0000", "COM4-DelayBetweenCharsMs": "0.0000", "Andor-Advanced | Snap Image Additional Delay (ms)": "0", "TILightPath-ExtraDelayMs": "0.0000", "Andor-Exposure": "100.00", "Andor-TransposeCorrection": "0", "COM4-AnswerTimeout": "500.0000", "Andor-CCDTemperature Help": "Wait for temperature to stabilize before acquisition.", "COM4-Description": "Serial port driver (boost:asio)", "COM3-Description": "Serial port driver (boost:asio)", "YPositionUm": -937.6, "COM3-Parity": "None", "COM1-BaudRate": "9600", "Andor-VerticalSpeed": "3.73", "Shutter-A-Description": "Sutter Lambda shutter adapter", "XYStage-TransposeMirrorY": "0", "XPositionUm": 13107.300000000001, "XYStage-TransposeMirrorX": "0", "Andor-TimeOut": "10000", "Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000141_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-141-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 141, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 141, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:41:10 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "1", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 1, "TIScope-SoftwareVersion": "4.4.1.728", "COM3-Handshaking": "Off", "Andor-Gain": "3", "Core-Shutter": "IntensiLightShutter", "TILightPath-State": "1", "UUID": "9db749ea-b20d-4ced-93ee-1af4acd45239", "Core-Camera": "Andor", "Core-TimeoutMs": "5000", "Core-SLM": "", "XYStage-JoyStick Fast Speed": "60", "Shutter-A-NDSetting": "1", "XYStage-Maximum Speed (Do Not Change)": "8.5760", "ElapsedTime-ms": 1411687, "TIPFSStatus-FullFocusTimeoutMs": "5000.0000", "COM1-Handshaking": "Off", "TIPFSStatus-State": "On", "Andor-Shutter TTL Value": "High to Open", "IntensiLightShutter-Description": "Nikon IntensiLight Shutter adapter", "Frame": 141, "Core-ChannelGroup": "Channel", "PositionIndex": 1, "Width": 1004, "WaitInterval": null, "TITIRF-Mirror": "Out", "Shutter-A-Port": "COM1", "TIFilterBlock1-Name": "TIFilterBlock1", "IntensiLightShutter-Name": "IntensiLightShutter", "COM3-StopBits": "1", "PositionName": "Pos1", "TINosePiece-ExtraDelayMs": "0.0000", "PixelSizeUm": 0.08, "Height": 1002, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000141_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-141-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 141, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 142, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000141_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-142-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 142, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000144_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-145-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 145, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 145, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:41:50 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "1", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 0, "TIScope-SoftwareVersion": "4.4.1.728", "COM3-Handshaking": "Off", "Andor-Gain": "3", "Core-Shutter": "Shutter-A", "TILightPath-State": "1", "UUID": "3454b158-12cc-4ad2-b919-378715e0dfcc", "Core-Camera": "Andor", "Core-TimeoutMs": "5000", "Core-SLM": "", "XYStage-JoyStick Fast Speed": "60", "Shutter-A-NDSetting": "1", "XYStage-Maximum Speed (Do Not Change)": "8.5760", "ElapsedTime-ms": 1451519, "TIPFSStatus-FullFocusTimeoutMs": "5000.0000", "COM1-Handshaking": "Off", "TIPFSStatus-State": "On", "Andor-Shutter TTL Value": "High to Open", "IntensiLightShutter-Description": "Nikon IntensiLight Shutter adapter", "Frame": 145, "Core-ChannelGroup": "Channel", "PositionIndex": 1, "Width": 1004, "WaitInterval": null, "TITIRF-Mirror": "Out", "Shutter-A-Port": "COM1", "TIFilterBlock1-Name": "TIFilterBlock1", "IntensiLightShutter-Name": "IntensiLightShutter", "COM3-StopBits": "1", "PositionName": "Pos1", "TINosePiece-ExtraDelayMs": "0.0000", "PixelSizeUm": 0.08, "Height": 1002, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000145_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-145-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 145, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 145, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000145_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-145-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 145, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000152_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-152-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 152, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000152_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-153-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 153, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000155_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-156-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 156, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 156, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000156_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-156-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 156, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 156, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000156_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-156-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 156, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000159_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-159-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 159, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000159_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-160-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 160, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000160_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-160-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 160, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000163_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-163-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 163, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 163, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000163_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-163-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 163, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 164, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000163_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-164-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 164, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Binning": "1", "Andor-ReadoutTime": "38.19", "COM4-Handshaking": "Off", "Andor-FrameTransfer": "Off", "Andor-Description": "Andor camera adapter", "COM3-DelayBetweenCharsMs": "0.0000", "PixelType": "GRAY16", "Andor-TransposeXY": "0", "COM1-DelayBetweenCharsMs": "0.0000", "COM4-DelayBetweenCharsMs": "0.0000", "Andor-Advanced | Snap Image Additional Delay (ms)": "0", "TILightPath-ExtraDelayMs": "0.0000", "Andor-Exposure": "100.00", "Andor-TransposeCorrection": "0", "COM4-AnswerTimeout": "500.0000", "Andor-CCDTemperature Help": "Wait for temperature to stabilize before acquisition.", "COM4-Description": "Serial port driver (boost:asio)", "COM3-Description": "Serial port driver (boost:asio)", "YPositionUm": -937.6, "COM3-Parity": "None", "COM1-BaudRate": "9600", "Andor-VerticalSpeed": "3.73", "Shutter-A-Description": "Sutter Lambda shutter adapter", "XYStage-TransposeMirrorY": "0", "XPositionUm": 13107.300000000001, "XYStage-TransposeMirrorX": "0", "Andor-TimeOut": "10000", "Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000166_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-167-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 167, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 167, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:45:30 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "1", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 0, 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000167_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-167-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 167, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 167, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", "AxisPositions": null, "Andor-1. 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000167_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-167-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 167, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000170_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-170-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 170, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 171, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:46:00 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "2", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 2, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000170_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-171-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 171, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 171, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000171_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-171-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 171, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000174_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-174-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 174, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 174, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000174_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-174-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 174, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 175, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000174_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-175-0-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "Phase (ETGFP)", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 175, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 178, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000178_Phase (ETGFP)_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-178-1-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "ETGFP", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 178, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "2-ETGFP", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "58.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 20, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": 178, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", 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"Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000178_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-178-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 178, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", 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"Binning": "1", "Andor-ReadoutTime": "38.19", "COM4-Handshaking": "Off", "Andor-FrameTransfer": "Off", "Andor-Description": "Andor camera adapter", "COM3-DelayBetweenCharsMs": "0.0000", "PixelType": "GRAY16", "Andor-TransposeXY": "0", "COM1-DelayBetweenCharsMs": "0.0000", "COM4-DelayBetweenCharsMs": "0.0000", "Andor-Advanced | Snap Image Additional Delay (ms)": "0", "TILightPath-ExtraDelayMs": "0.0000", "Andor-Exposure": "20.00", "Andor-TransposeCorrection": "0", "COM4-AnswerTimeout": "500.0000", "Andor-CCDTemperature Help": "Wait for temperature to stabilize before acquisition.", "COM4-Description": "Serial port driver (boost:asio)", "COM3-Description": "Serial port driver (boost:asio)", "YPositionUm": -937.6, "COM3-Parity": "None", "COM1-BaudRate": "9600", "Andor-VerticalSpeed": "3.73", "Shutter-A-Description": "Sutter Lambda shutter adapter", "XYStage-TransposeMirrorY": "0", "XPositionUm": 13107.300000000001, "XYStage-TransposeMirrorX": "0", "Andor-TimeOut": "10000", "Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000179_ETGFP_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 }, "FrameKey-179-2-0": { "Core-Focus": "TIPFSOffset", "Andor-ReadoutMode": "35.000 MHz", "Channel": "TRITC", "Core-Initialize": "1", "Shutter-A-State": "0", "COM1-Verbose": "0", "TIPFSStatus-FullFocusWaitAfterLockMs": "0.0000", "XYStage-SerialResponse": "", "Andor-FanMode": "Full", "FrameIndex": 179, "XYStage-Version": "Version: USB-9.2d ", "XYStage-BuildName": "STD_XY", "COM1-Description": "Serial port driver (boost:asio)", "TIFilterBlock1-Label": "3-TRITC", "Andor-BaselineClamp": "Enabled", "XYStage-Backlash-B": "0.0400", "Andor-ActualInterval-ms": "138.19", "XYStage-Speed-S": "5.7459", "ROI": "0-0-1004-1002", "Andor-PixelType": "16bit", "COM1-AnswerTimeout": "500.0000", "Camera": "", "Andor-Region of Interest": "Full Image", "XYStage-Error-E(nm)": "400.0000", "XYStage-StepSizeX_um": "0.0100", "COM4-Parity": "None", "Core-ImageProcessor": "", "Andor-Advanced | Snap Image Timing Mode": "Delay for Exposure", "SlicePosition": null, "Andor-CoolerMode": "Fan off at shutdown", "Exposure-ms": 100, "XYStage-StepSizeY_um": "0.0100", "COM1-DataBits": "8", "TIPFSOffset-Position": "71.450000000000003", "Core-AutoShutter": "1", "XYStage-Acceleration-AC(ms)": "100", "Shutter-A-Mode": "Fast", "TILightPath-Label": "2-Left100", "Andor-Pre-Amp-Gain": "3.8x", "XYStage-Name": "XYStage", "NextFrame": null, "TILightPath-Name": "TILightPath", "Andor-Shutter Closing Time": "20", "Andor-EMSwitch": "On", "Core-XYStage": "XYStage", "AxisPositions": null, "Andor-1. Camera Information : | Type | Model | Serial No. |": "| iXon | DU8285_VP | 4497 |", "Time": "2015-08-27 13:47:30 -0700", "IntensiLightShutter-State": "0", "COM1-Parity": "None", "COM4-Name": "COM4", "Andor-Isolated Crop Mode": "Off", "COM4-BaudRate": "9600", "XYStage-Port": "COM3", "Andor-CCDTemperatureSetPoint": "-70", "TINosePiece-Label": "5-Plan Apo 100x NA 1.40 Oil", "Core-AutoFocus": "TIPFSStatus", "COM1-StopBits": "1", "XYStage-SerialCommand": "", "TIPFSOffset-Name": "TIPFSOffset", "TIScope-DeviceIndex": "1", "BitDepth": 14, "TIFilterBlock1-State": "2", "Slice": 0, "TIPFSStatus-Name": "TIPFSStatus", "XYStage-JoyStick Slow Speed": "5", "COM4-Verbose": "0", "COM3-AnswerTimeout": "500.0000", "Andor-KeepCleanTime": "0.00", "Shutter-A-Controller Info": "SC-v1.12S-", "TIFilterBlock1-ExtraDelayMs": "0.0000", "TINosePiece-Name": "TINosePiece", "TINosePiece-State": "4", "TIScope-DriverVersion": "micusb.sys 3.0.1.9", "Andor-Camera": "| iXon | DU8285_VP | 4497 |", "ChannelIndex": 2, "TIScope-SoftwareVersion": "4.4.1.728", "COM3-Handshaking": "Off", "Andor-Gain": "3", "Core-Shutter": "IntensiLightShutter", "TILightPath-State": "1", "UUID": "8b5c9621-48ab-4663-8dfd-d17a9ebd6ac5", "Core-Camera": "Andor", "Core-TimeoutMs": "5000", "Core-SLM": "", "XYStage-JoyStick Fast Speed": "60", "Shutter-A-NDSetting": "1", "XYStage-Maximum Speed (Do Not Change)": "8.5760", "ElapsedTime-ms": 1792145, "TIPFSStatus-FullFocusTimeoutMs": "5000.0000", "COM1-Handshaking": "Off", "TIPFSStatus-State": "On", "Andor-Shutter TTL Value": "High to Open", "IntensiLightShutter-Description": "Nikon IntensiLight Shutter adapter", "Frame": 179, "Core-ChannelGroup": "Channel", "PositionIndex": 1, "Width": 1004, "WaitInterval": null, "TITIRF-Mirror": "Out", "Shutter-A-Port": "COM1", "TIFilterBlock1-Name": "TIFilterBlock1", "IntensiLightShutter-Name": "IntensiLightShutter", "COM3-StopBits": "1", "PositionName": "Pos1", "TINosePiece-ExtraDelayMs": "0.0000", "PixelSizeUm": 0.08, "Height": 1002, "Andor-TransposeMirrorX": "0", "XYStage-CompileDate": "May 30 2013:16:54:11", "IntensiLightShutter-ND": "16", "COM3-Verbose": "1", "TIScope-FirmwareVersion": "Ti-E V1.30", "Andor-TransposeMirrorY": "0", "Andor-Shutter Opening Time": "20", "Summary": { "Slices": 1, "InitialPositionList": [ { "DeviceCoordinatesUm": {"XYStage": [ 13038.2, -1034.2 ]}, "GridColumnIndex": 0, "Label": "Pos0", "GridRowIndex": 0 }, { "DeviceCoordinatesUm": {"XYStage": [ 13107.300000000001, -937.6 ]}, "GridColumnIndex": 0, "Label": "Pos1", "GridRowIndex": 0 } ], "Interval_ms": 10000, "UUID": "ed027de8-a61a-42df-869c-2c86dabafe2f", "UserName": "cellshape", "Depth": 2, "PixelType": "GRAY16", "Time": "2015-08-27 13:17:40 -0700", "Date": "2015-08-27", "z-step_um": 0, "MetadataVersion": 10, "PositionIndex": 1, "SlicesFirst": false, "ChContrastMin": [ 0, 0, 0 ], "Width": 1004, "PixelAspect": 1, "MicroManagerVersion": "1.4.20", "ROI": [ 0, 0, 1004, 1002 ], "ChNames": [ "Phase (ETGFP)", "ETGFP", "TRITC" ], "IJType": 1, "GridRow": 0, "Comment": "", "Height": 1002, "GridColumn": 0, "Prefix": "082715_1", "PixelSize_um": 0.08, "Frames": 180, "BitDepth": 14, "KeepShutterOpenChannels": false, "Source": "Micro-Manager", "Channels": 3, "ComputerName": "vulcan_computer", "CustomIntervals_ms": [], "KeepShutterOpenSlices": false, "ChColors": [ -1, -13369600, -65536 ], "TimeFirst": false, "ChContrastMax": [ 65536, 65536, 65536 ], "Positions": 2, "Directory": "D:\\Rico Vulcan\\082715" }, "Source": "Andor", "XYStage-OverShoot(um)": "0.0000", "XYStage-Wait_Cycles": "0", "COM4-StopBits": "1", "COM3-Name": "COM3", "IntensiLightShutter-Port": "COM4", "Andor-Binning": "1", "Andor-FrameTransfer Help": "Should only turn on FrameTransfer if using Burst or Live mode.", "COM4-DataBits": "8", "TIPFSStatus-Status": "Locked in focus", "TIScope-DeviceAddress": "USB_DEVICE(1)", "COM3-DataBits": "8", "XYStage-MotorOnOff": "On", "XYStage-Description": "ASI XY stage driver adapter", "TITIRF-Name": "TITIRF", "Andor-Shutter": "Open", "Binning": "1", "Andor-ReadoutTime": "38.19", "COM4-Handshaking": "Off", "Andor-FrameTransfer": "Off", "Andor-Description": "Andor camera adapter", "COM3-DelayBetweenCharsMs": "0.0000", "PixelType": "GRAY16", "Andor-TransposeXY": "0", "COM1-DelayBetweenCharsMs": "0.0000", "COM4-DelayBetweenCharsMs": "0.0000", "Andor-Advanced | Snap Image Additional Delay (ms)": "0", "TILightPath-ExtraDelayMs": "0.0000", "Andor-Exposure": "100.00", "Andor-TransposeCorrection": "0", "COM4-AnswerTimeout": "500.0000", "Andor-CCDTemperature Help": "Wait for temperature to stabilize before acquisition.", "COM4-Description": "Serial port driver (boost:asio)", "COM3-Description": "Serial port driver (boost:asio)", "YPositionUm": -937.6, "COM3-Parity": "None", "COM1-BaudRate": "9600", "Andor-VerticalSpeed": "3.73", "Shutter-A-Description": "Sutter Lambda shutter adapter", "XYStage-TransposeMirrorY": "0", "XPositionUm": 13107.300000000001, "XYStage-TransposeMirrorX": "0", "Andor-TimeOut": "10000", "Andor-Trigger": "Software", "Shutter-A-Name": "Shutter-A", "IntensiLightShutter-Version": "V1.00", "FileName": "img_000000179_TRITC_000.tif", "Andor-CCDTemperature": "-66", "TITIRF-Position": "0", "Core-Galvo": "", "XYStage-JoyStick Reverse": "Off", "COM3-BaudRate": "9600", "Position": "Default", "XYStage-OnlySendSerialCommandOnChange": "Yes", "Andor-VerticalClockVoltage": "Normal", "Andor-OptAcquireMode Description": "", "COM1-Name": "COM1", "CameraChannelIndex": 0, "SliceIndex": 0, "XYStage-FinishError-PCROS(nm)": "24.0000", "ZPositionUm": 71.45 } }